sam2bam

Convert SAM to BAM using samtools

Converts a FASTQ file to MAQ BFQ format.

Commands

clean

Remove all job data, not the Moa job itself, note that this must be implemented by the template.

run

no help defined

Filesets

input

input SAM files

output

type: map

source: input

category: output

optional: {}

pattern: ./*.bam

Parameters

miscellaneous

Backend

gnumake

Author

Mark Fiers

Creation date

Wed Nov 10 07:56:48 2010

Modification date

Wed Nov 10 07:56:48 2010