Gmap
Run GMAP on an set of input files (query) vs a database index.
align
type: mapsource: inputcategory: outputoptional: {}pattern: ./align/*.align
genepred
type: mapsource: inputcategory: outputoptional: {}pattern: ./genepred/*.genepred
gff
type: mapsource: inputcategory: outputoptional: {}pattern: ./gff/*.gff
gff_invert
type: mapsource: inputcategory: outputoptional: {}pattern: ./gff/*.invert.gff
raw
type: mapsource: inputcategory: outputoptional: {}pattern: ./raw/*.raw
Gmap db
extra parameters to feed to gmap
Source field to use in the output GFF
Invert the GFF (T/F)