cdsmatrix
CdsMatrix
Predicts (prokaryotic) using glimmer3.
Commands
- clean
- Remove all job data, not the Moa job itself, note that this must be implemented by the template.
- run
- Generate a matrix of CDS’s
Filesets
- input
- Directory with the cds files for Glimmer3
- output
Output blast files
type: map
source: input
category: output
optional: True
pattern: ./*.out
- reference
reference multi fasta file
type: single
category: prerequisite
optional: {}
pattern: */*.fasta
- table
table files
type: map
source: input
category: output
optional: True
pattern: ./*.tab
Parameters
- cutoff
score cutoff value - disregards hits below this score
type: {}
default: 100
optional: True
miscellaneous
- Backend
- ruff
- Author
- Mark Fiers
- Creation date
- Wed Nov 10 07:56:48 2010
- Modification date
- Thu, 21 Jul 2011 20:31:10 +1200