fastqc
Run FastQC for fastq QC
Run FastQC on a set a fastq files - quality assessment
Commands
- finish
Run Fastqc
finish delegates execution to: report
- report
- Generate a simple fastqc report
- run
- no help defined
Filesets
- input
- fastqc input files’
- touch
touch files - track if a file has been processed - do not touch this unless you know what you’re doing.
type: map
source: input
category: output
optional: True
pattern: ./*.touch
Parameters
- output_dir
output directory for the fastQC report
type: dir
default: .
optional: True
miscellaneous
- Backend
- ruff
- Author
- Mark Fiers
- Creation date
- Thu, 28 Apr 2011 09:27:17 +1200
- Modification date
- Thu, 28 Apr 2011 14:19:04 +1200