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Moa 0.11.0 documentation
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Templates
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Contents:
abyss_pe
abyss_se
adhoc
archroot
bamextract
bartab
bdbb
bfast_aln
bfast_db
blast
blastdb
blat
bowtie
bowtie_pe
bowtie_se
bowtiedb
bwa_aln
bwa_index
bwa_sampe
bwa_samse
cdsmatrix
cleanFasta
clustalgroup
clustalpair
clustalw
concatenate
dottup
empty
fasta2gff
fastainfo
fastqc
fastx_clipper
fastx_qual_stats
filterwgs_pair
gather
genemarks
getorf
glimmer3
gmap
gmapdb
gsMapper
h_blast
hagfish
kanga
kangar_pe
kangar_se
kangax
lftp
map
map2
map22
maq_fasta2bfa
maq_fastq2bfq
maq_match_pair
maq_pe
maq_se
moatest
mummer
ncbi
newbler
newjobtest
nstretch
orthomcl
pregap
project
reduce
sam2bam
samtools_pileup
sffinfo
simple
smalt_pe
smaltdb
soapdenovo_pe
statsidx
sync
unittest
varscan
vpcr
vpcr_list
wget
Table of contents
Goals
Introduction
Installation
Three core templates
Synchronizing jobs
How to write a template
Command reference
Templates
abyss_pe
abyss_se
adhoc
archroot
bamextract
bartab
bdbb
bfast_aln
bfast_db
blast
blastdb
blat
bowtie
bowtie_pe
bowtie_se
bowtiedb
bwa_aln
bwa_index
bwa_sampe
bwa_samse
cdsmatrix
cleanFasta
clustalgroup
clustalpair
clustalw
concatenate
dottup
empty
fasta2gff
fastainfo
fastqc
fastx_clipper
fastx_qual_stats
filterwgs_pair
gather
genemarks
getorf
glimmer3
gmap
gmapdb
gsMapper
h_blast
hagfish
kanga
kangar_pe
kangar_se
kangax
lftp
map
map2
map22
maq_fasta2bfa
maq_fastq2bfq
maq_match_pair
maq_pe
maq_se
moatest
mummer
ncbi
newbler
newjobtest
nstretch
orthomcl
pregap
project
reduce
sam2bam
samtools_pileup
sffinfo
simple
smalt_pe
smaltdb
soapdenovo_pe
statsidx
sync
unittest
varscan
vpcr
vpcr_list
wget
Moa API
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Moa 0.11.0 documentation
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